Hi Nicholas, All of the information about how these trees were generated are in the README.txt files which are located in the current directories of the links that you provided. Also, please note that in the the README.txt files there are links to our genomewiki pages that provide more information about how the tree was corrected.
I hope this clarifies things for you. If you have further questions, please contact the mailing list: [email protected]. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ----- Original Message ----- From: "Nicholas Price" <[email protected]> To: [email protected] Sent: Thursday, April 14, 2011 5:55:41 AM Subject: [Genome] Tree difference Hi, Can you please explain why the phylogenetic trees at http://hgdownload.cse.ucsc.edu/goldenPath/hg19/multiz46way/ and http://hgdownload.cse.ucsc.edu/goldenPath/hg19/phastCons46way/ <http://hgdownload.cse.ucsc.edu/goldenPath/hg19/phastCons46way/>in respect to the relation between macaque and baboon..How were these trees generated? Nicholas -- The oppressed become the oppressors Paulo Freire (1921-1997) _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
