Dear All,
https://genome-cancer.soe.ucsc.edu/cancerGenomics/download/CGB_setup.htm
While setup CANCER GENOMICS BROWSER as a guideline ("2. Compile library
code" step of the guideline above link), I received an error message as
following:
$cd kent/src
$make clean; make alpha
......
......
strip /root/bin/x86_64/git-reports
make[2]: Leaving directory `/root/jksrc/kent/src/utils/git-reports'
gitTools
make[2]: Entering directory `/root/jksrc/kent/src/utils/gitTools'
mkdir: cannot create directory `/root/bin/scripts': File exists
make[2]: *** [/root/bin/scripts/gitFiles] Error 1
make[2]: Leaving directory `/root/jksrc/kent/src/utils/gitTools'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/root/jksrc/kent/src/utils'
make: *** [utils-alpha] Error 2
$
In /root/bin directory, a file 'scripts' has been already created, but
compiler might try to create directory of the same name.
Could anyone solve this problem?
I've already installed UCSC Genome Browser (with Human Genome, hg18) on my
linux machine.
Seon-Kyu Kim
_______________________________________________
Genome maillist - [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome
