Thanks Greg! That answers my question. On 8/16/11 3:56 PM, "Greg Roe" <[email protected]> wrote:
> Hi Abi, > > The main issue here I believe is that this data is in the form of a > wiggle file/track, and you're downloading it into a bed file, thus > stripping some of the information out. I would recommend downloading the > original data from our downloads page: > > http://hgdownload.cse.ucsc.edu/downloads.html > > The file(s) you want are here: > http://hgdownload.cse.ucsc.edu/goldenPath/hg19/phastCons46way/placentalMammals> / > > You may also want to take a look at the information given about the data > one directory up from there. > > Please let us know if you have any additional questions: [email protected] > > - > Greg Roe > UCSC Genome Bioinformatics Group > > > On 8/15/11 1:07 PM, Lakshmanan, Abirami wrote: >> Hi, >> >> I downloaded the tb_phastConsElements46wayPlacental table (hg19) in bed >> format. The downloaded file does not match with the one displayed in the >> genome browser view. I find many CNE elements missing in the file I >> downloaded. Is there a way where I can get the entire data for Placental >> Mammal Conserved Elements. >> >> Thanks, >> Abi >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
