Hi all, About the multiz genomic alignments (I use those downloaded from the table browser in maf format):
I understand each aligned sequence represent the "best" hit to the reference genomic segment.Is there a way to compare the best hit to other less significant hits, in order to know whether the best hit is significantly better than other hits ? More generally, my problem is to find a simple way to exclude from my analyses alignments where it is not clear if the aligned sequences are real orthologs. Best, Assaf _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
