Hi Varun, The table browser (http://genome.ucsc.edu/cgi-bin/hgTables)is the tool to get the information that you are after. Please take a look at the User's Guide: http://genome.ucsc.edu/goldenPath/help/hgTablesHelp.html and the Open Helix Tutorials: http://www.openhelix.com/cgi/tutorialInfo.cgi?id=28 on how to use the table browser.
If you have further questions after going through those tutorials, please contact the mailing list: [email protected]. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ---------- Forwarded message ---------- From: varun gupta <[email protected]> Date: Thu, Sep 15, 2011 at 10:52 AM Subject: [Genome] Hi To: [email protected] Hi everyone Thank you for all your support you guys have been giving. I have a question. Suppose i have a list of genes with their coordinates. For example see this Gene Coordinates Size of gene RPSA chr19:23,945,816-24,010,917 65,102 RPS2 chr16:2,012,062-2,014,827 2766 RPS3 chr11:75,110,562-75,116,730 6169 i want to get the sequence of the bases between those coordinates for different genes Can you help me out in this Hope to hear from you soon. Regards Varun _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
