Hello, I have mice genomic coordinates database (chr, coordinate and strand), each record has one nucleotide range. I need a little guidance in order to this data, if possible. 1. list of the one (and only) nucleotide in each coordinate. for example the input will be chr 8 46418501 (-) and the output should be C. 2. if there any SNPs in this coordinate. 3. and maybe if there some way to know the codon (by refseq) that the nucleotide belongs to.
thanks! _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
