Hi Fahim, We looked into your issue and we suspect that there is an issue with NCBI and we suggest that you contact them.
If you have further questions, please contact the mailing list: [email protected]. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ---------- Forwarded message ---------- From: Fahim Mohammad <[email protected]> Date: Tue, Dec 6, 2011 at 3:52 PM Subject: [Genome] How the chromosomes with 2L and 2R are aligned To: [email protected] Hi I am working on Anopheles Gambiae genome and I am facing problem when comparing the result from NCBI and genome browser. The chromosome names at UCSC browser that AnoGam1 have are chr 2L, 2R, 3L, 3R, X and Un where as NCBI somehow combine L and R files together to get one genome. Is there a way to make the data from UCSC and NCBI such that the chromosome nomenclature as well as the coordinates becomes similar. Thanks Fahim _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
