Hello, I made an algorithm which translates data from refseq and location, to genomic coordinate, using the mouse refseq data I've downloaded from table browser. for example NM_145525 3497 is translated to chr2 76434160. there is a problem when reseq is not starts in 0 location, for example NM_138302 starts in 8 (image attached) , but i didn't find the way that I can see in which location any refseg begins, (other than checking one by one in genome browser). link: http://genome.ucsc.edu/cgi-bin/hgc?hgsid=239531637&o=89202361&t=89207468&g=refGene&i=NM_138302.
Is there any way to acchive this data? thanks! have a nice day. Yishay
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