Hi Mehar, It sounds like you are asking what the difference is between phastCons and phyloP. These differences are explained in the first part of this previously answer mailing list question:
https://lists.soe.ucsc.edu/pipermail/genome/2011-April/025585.html Hopefully this answers your question. If this doesn't answer your question, please email the list ([email protected]) with specific examples. Thanks! Vanessa Kirkup Swing UCSC Genome Bioinformatic Group ---------- Forwarded message ---------- From: Mehar <[email protected]> Date: Tue, Apr 3, 2012 at 1:28 PM Subject: Re: [Genome] Conservation scores To: [email protected] Hi, Thanks for your reply. My question is what is the difference in scores between the two tables. PhasCons have a lod score which ranges from 1 to 1000 and the other from ucsc track tables give a conservation score which ranges from 0 to 1. My query is, what is the difference betwwen these two scores? _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
