Hi Maíra, The databases available from the MySQL server are actually the same as those available via the Table Browser. If you are using the Human GRCh37/hg19 assembly, which is the one that the Genome Browser defaults to unless you choose a different assembly, then the database you want to use is hg19.
You can see other databases in the Table Browser by choosing different clades and genomes and looking at the assembly drop-down menu. You can also see a list of available assemblies and their database names (under the "UCSC Version" column) here: http://genome.ucsc.edu/FAQ/FAQreleases.html#release1 If you have further questions, please contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group On 7/6/12 1:41 PM, Maíra R. Rodrigues wrote: > Dear all, > > I have connected to the ucsc database, as shown on the web help pages, as > follows: > > mysql --user=genome --host=genome-mysql.cse.ucsc.edu -A > > > However, once connected, there are a lot of databases listed with "show > databases". > I would like to know to which database I should connect to search the > information available on the Table Browser form? > > Thank you in advance! > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
