Hi, Vaidehi. You'll need to use the table browser. These two previous list questions should tell you the steps you need: https://lists.soe.ucsc.edu/pipermail/genome/2008-July/016761.html https://lists.soe.ucsc.edu/pipermail/genome/2012-February/028392.html
Note, that you can limit the output in the table browser to a particular gene (or genes) by pasting gene names in on the "identifiers" line...or you can limit it to certain positions on the "region" line. Please let us know if you have any additional questions: [email protected] - Greg Roe UCSC Genome Bioinformatics Group On 7/29/12 4:15 AM, Vaidehi Jobanputra wrote: > How do I find the exact start and the stop of the exon or intron from the > base position. For example: Chr2:50,909,653-50,959,228 tells me this is an > intron 5 of the NRXN1 gene by putting the mouse over the exon triangles. But > this is not exact, it just gives to approximate idea. How do I accurately > find out the base position of the intron/exon boundary (start/stop). Would > appreciate your response. > Thanks > > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
