commit: 53562c6fe46a84363a92dca87a7e4e4c6f78f77f Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sun Mar 23 16:33:19 2014 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Sun Mar 23 16:33:19 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=53562c6f
sci-biology/flexbar: new package, needs >=sci-biology/seqan-1.4.1 to appear first in the tree Package-Manager: portage-2.2.7 --- sci-biology/flexbar/ChangeLog | 10 ++++++++++ sci-biology/flexbar/flexbar-2.4.ebuild | 23 +++++++++++++++++++++++ sci-biology/flexbar/metadata.xml | 9 +++++++++ 3 files changed, 42 insertions(+) diff --git a/sci-biology/flexbar/ChangeLog b/sci-biology/flexbar/ChangeLog new file mode 100644 index 0000000..371eef0 --- /dev/null +++ b/sci-biology/flexbar/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/flexbar +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*flexbar-2.4 (23 Mar 2014) + + 23 Mar 2014; Martin Mokrejs <[email protected]> +flexbar-2.4.ebuild, + +metadata.xml: + sci-biology/flexbar: new package, needs >=sci-biology/seqan-1.4.1 to appear + first in the tree diff --git a/sci-biology/flexbar/flexbar-2.4.ebuild b/sci-biology/flexbar/flexbar-2.4.ebuild new file mode 100644 index 0000000..5b65338 --- /dev/null +++ b/sci-biology/flexbar/flexbar-2.4.ebuild @@ -0,0 +1,23 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit cmake-utils + +DESCRIPTION="Barcode, MID tag and adapter sequence removal" +HOMEPAGE="https://sourceforge.net/p/flexbar/wiki/Manual"; +SRC_URI="http://sourceforge.net/projects/flexbar/files/2.4/flexbar_v2.4_src.tgz"; + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="" +IUSE="" + +CDEPEND="dev-cpp/tbb + >=sci-biology/seqan-1.4.1" +DEPEND="${CDEPEND}" +RDEPEND="${CDEPEND}" + +S="${WORKDIR}"/"${PN}"_v"${PV}"_src diff --git a/sci-biology/flexbar/metadata.xml b/sci-biology/flexbar/metadata.xml new file mode 100644 index 0000000..07b5255 --- /dev/null +++ b/sci-biology/flexbar/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata>
