commit: 2ae4310a77950f476976a7556b8291a1ad8291ba Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Sun Mar 23 17:08:10 2014 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Sun Mar 23 17:08:10 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2ae4310a
sci-biology/trim_galore: a skeleton for a new package, needs sci-biology/fastqc to move ahead Package-Manager: portage-2.2.7 --- sci-biology/trim_galore/ChangeLog | 10 ++++++++++ sci-biology/trim_galore/metadata.xml | 9 +++++++++ sci-biology/trim_galore/trim_galore-0.3.3.ebuild | 20 ++++++++++++++++++++ 3 files changed, 39 insertions(+) diff --git a/sci-biology/trim_galore/ChangeLog b/sci-biology/trim_galore/ChangeLog new file mode 100644 index 0000000..3dba931 --- /dev/null +++ b/sci-biology/trim_galore/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for sci-biology/trim_galore +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*trim_galore-0.3.3 (23 Mar 2014) + + 23 Mar 2014; Martin Mokrejs <[email protected]> +metadata.xml, + +trim_galore-0.3.3.ebuild: + sci-biology/trim_galore: a skeleton for a new package, needs sci- + biology/fastqc to move ahead diff --git a/sci-biology/trim_galore/metadata.xml b/sci-biology/trim_galore/metadata.xml new file mode 100644 index 0000000..07b5255 --- /dev/null +++ b/sci-biology/trim_galore/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/trim_galore/trim_galore-0.3.3.ebuild b/sci-biology/trim_galore/trim_galore-0.3.3.ebuild new file mode 100644 index 0000000..258ee38 --- /dev/null +++ b/sci-biology/trim_galore/trim_galore-0.3.3.ebuild @@ -0,0 +1,20 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +DESCRIPTION="Wrapper around Cutadapt and FastQC to consistently apply quality and adapter trimming" +HOMEPAGE="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/"; +SRC_URI="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/trim_galore_v0.3.3.zip"; + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND="" +RDEPEND=" + sci-biology/cutadapt + sci-biology/fastqc + ${DEPEND}"
