commit: 6662c1697f2b8a3ca44c0f5e72cdafff5da4d7b8 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Tue Apr 15 09:06:13 2014 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Tue Apr 15 09:06:13 2014 +0000 URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=6662c169
sci-biology/velvetk: new package Package-Manager: portage-2.2.7 --- sci-biology/velvetk/ChangeLog | 9 +++++++++ sci-biology/velvetk/metadata.xml | 9 +++++++++ sci-biology/velvetk/velvetk-20120606.ebuild | 29 +++++++++++++++++++++++++++++ 3 files changed, 47 insertions(+) diff --git a/sci-biology/velvetk/ChangeLog b/sci-biology/velvetk/ChangeLog new file mode 100644 index 0000000..add4df7 --- /dev/null +++ b/sci-biology/velvetk/ChangeLog @@ -0,0 +1,9 @@ +# ChangeLog for sci-biology/velvetk +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: $ + +*velvetk-20120606 (15 Apr 2014) + + 15 Apr 2014; Martin Mokrejs <[email protected]> +metadata.xml, + +velvetk-20120606.ebuild: + sci-biology/velvetk: new package diff --git a/sci-biology/velvetk/metadata.xml b/sci-biology/velvetk/metadata.xml new file mode 100644 index 0000000..2bc8930 --- /dev/null +++ b/sci-biology/velvetk/metadata.xml @@ -0,0 +1,9 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <herd>sci-biology</herd> + <maintainer> + <email>[email protected]</email> + <name>Martin Mokrejs</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/velvetk/velvetk-20120606.ebuild b/sci-biology/velvetk/velvetk-20120606.ebuild new file mode 100644 index 0000000..2ebb4f3 --- /dev/null +++ b/sci-biology/velvetk/velvetk-20120606.ebuild @@ -0,0 +1,29 @@ +# Copyright 1999-2014 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit perl-module + +DESCRIPTION="Estimate the best k-mer size to use for your Velvet de novo assembly" +HOMEPAGE="http://www.vicbioinformatics.com/software.velvetk.shtml"; +SRC_URI="http://www.vicbioinformatics.com/velvetk.pl"; + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}" + +src_prepare(){ + cp -p "${DISTDIR}"/velvetk.pl . || die +} + +src_install(){ + dobin velvetk.pl +}
