commit: e9643bc810aa1b949e80bc0619831f7235c5b9e4
Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Sun Jan 29 11:46:31 2017 +0000
Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Sun Jan 29 11:59:23 2017 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=e9643bc8
sci-biology/repeatmasker: QA fixes
BUMP EAPI to 6
sort deps
use optfeature
Add missing quotes
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild | 17 +++++++++--------
1 file changed, 9 insertions(+), 8 deletions(-)
diff --git a/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
b/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
index c320942..3da4241 100644
--- a/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
+++ b/sci-biology/repeatmasker/repeatmasker-4.0.6-r3.ebuild
@@ -2,7 +2,7 @@
# Distributed under the terms of the GNU General Public License v2
# $Id$
-EAPI=5
+EAPI=6
inherit eutils
@@ -19,11 +19,12 @@ IUSE=""
DEPEND=">=dev-lang/perl-5.8"
RDEPEND="
+ dev-perl/Text-Soundex
+ sci-biology/phrap
+ sci-biology/repeatmasker-libraries
sci-biology/rmblast
>=sci-biology/trf-4.0.4
- sci-biology/repeatmasker-libraries
- sci-biology/phrap
- dev-perl/Text-Soundex"
+"
S="${WORKDIR}/RepeatMasker"
@@ -45,7 +46,7 @@ src_configure() {
# below try to define paths to trf, cross_match, rmblast and nhmmer as
search tools
echo "
env
-${S}
+\"${S}\"
/opt/bin
1
/usr/bin
@@ -96,8 +97,8 @@ pkg_postinst(){
einfo "PATHs to the search binaries are defined in"
einfo "/usr/share/${PN}/lib/RepeatMaskerConfig.pm"
einfo "Supported search engines are:"
- einfo "cross_match from sci-biology/phrap"
- einfo "rmblast from sci-biology/rmblast"
- einfo "nhmmer from >=sci-biology/hmmer-3.1"
+ optfeature "cross_match" sci-biology/phrap
+ optfeature "rmblast" sci-biology/rmblast
+ optfeature "nhmmer" >=sci-biology/hmmer-3.1
einfo "abblast/wublast from http://blast.advbiocomp.com/licensing";
}
