commit: c8849b8d8ee3b0f1ba02fb47681f1a4f72a4106f Author: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org> AuthorDate: Sat Mar 3 16:09:07 2018 +0000 Commit: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org> CommitDate: Sat Mar 3 17:44:08 2018 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c8849b8d
sci-biology/amos: Drop old Closes: https://bugs.gentoo.org/645140 Package-Manager: Portage-2.3.24, Repoman-2.3.6 sci-biology/amos/amos-3.1.0-r3.ebuild | 53 ----------------------------------- 1 file changed, 53 deletions(-) diff --git a/sci-biology/amos/amos-3.1.0-r3.ebuild b/sci-biology/amos/amos-3.1.0-r3.ebuild deleted file mode 100644 index 33c30995b11..00000000000 --- a/sci-biology/amos/amos-3.1.0-r3.ebuild +++ /dev/null @@ -1,53 +0,0 @@ -# Copyright 1999-2018 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 ) - -inherit autotools flag-o-matic python-single-r1 qmake-utils - -DESCRIPTION="A Modular, Open-Source whole genome assembler" -HOMEPAGE="http://amos.sourceforge.net/"; -SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz - https://dev.gentoo.org/~soap/distfiles/${PN}-3.1.0-fix-c++14.patch.bz2"; - -LICENSE="Artistic" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="qt4" -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -DEPEND="qt4? ( dev-qt/qtcore:4 )" -RDEPEND="${DEPEND} - ${PYTHON_DEPS} - dev-perl/DBI - dev-perl/Statistics-Descriptive - sci-biology/mummer" - -PATCHES=( - "${FILESDIR}"/${P}-gcc-4.7.patch - "${FILESDIR}"/${P}-goBambus2.py-indent-and-cleanup.patch - "${WORKDIR}"/${P}-fix-c++14.patch - "${FILESDIR}"/${P}-qa-Wformat.patch - "${FILESDIR}"/${P}-fix-build-system.patch -) - -src_prepare() { - default - eautoreconf - - # prevent GCC 6 log pollution due - # to hash_map deprecation in C++11 - append-cxxflags -Wno-cpp -} - -src_configure() { - econf \ - --with-qmake-qt4=$(usex qt4 $(qt4_get_bindir)/qmake no) -} - -src_install() { - default - python_fix_shebang "${ED%/}"/usr/bin/goBambus2 -}
