jlec 14/10/17 13:51:56 Modified: ChangeLog Added: seqan-1.4.2.ebuild Log: sci-biology/seqan: Version BUmp (Portage version: 2.2.14_rc1/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Revision Changes Path 1.5 sci-biology/seqan/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/seqan/ChangeLog?rev=1.5&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/seqan/ChangeLog?rev=1.5&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/seqan/ChangeLog?r1=1.4&r2=1.5 Index: ChangeLog =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/seqan/ChangeLog,v retrieving revision 1.4 retrieving revision 1.5 diff -u -r1.4 -r1.5 --- ChangeLog 17 Jul 2013 07:09:45 -0000 1.4 +++ ChangeLog 17 Oct 2014 13:51:56 -0000 1.5 @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/seqan -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/seqan/ChangeLog,v 1.4 2013/07/17 07:09:45 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/seqan/ChangeLog,v 1.5 2014/10/17 13:51:56 jlec Exp $ + +*seqan-1.4.2 (17 Oct 2014) + + 17 Oct 2014; Justin Lecher <[email protected]> +seqan-1.4.2.ebuild, + +files/seqan-1.4.2-include.patch, +files/seqan-1.4.2-shared.patch: + Version BUmp 17 Jul 2013; Justin Lecher <[email protected]> seqan-1.3.1-r1.ebuild: Add missing dep 1.1 sci-biology/seqan/seqan-1.4.2.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/seqan/seqan-1.4.2.ebuild?rev=1.1&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/seqan/seqan-1.4.2.ebuild?rev=1.1&content-type=text/plain Index: seqan-1.4.2.ebuild =================================================================== # Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/seqan/seqan-1.4.2.ebuild,v 1.1 2014/10/17 13:51:56 jlec Exp $ EAPI=5 PYTHON_COMPAT=( python2_7 ) inherit cmake-utils flag-o-matic python-single-r1 DESCRIPTION="C++ Sequence Analysis Library" HOMEPAGE="http://www.seqan.de/"; SRC_URI="http://packages.${PN}.de/${PN}-src/${PN}-src-${PV}.tar.gz"; SLOT="0" LICENSE="BSD GPL-3" KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" IUSE="" REQUIRED_USE="${PYTHON_REQUIRED_USE}" RDEPEND="${PYTHON_DEPS} sci-biology/samtools" DEPEND="${RDEPEND}" #S="${WORKDIR}"/${P}/cmake PATCHES=( "${FILESDIR}"/${P}-shared.patch "${FILESDIR}"/${P}-include.patch ) src_prepare() { rm -f \ util/cmake/FindZLIB.cmake \ || die touch extras/apps/seqan_flexbar/README || die sed \ -e "s:share/doc:share/doc/${PF}:g" \ -i docs/CMakeLists.txt util/cmake/SeqAnBuildSystem.cmake || die cmake-utils_src_prepare } src_configure() { local mycmakeargs=( -DZLIB_INCLUDE_DIRS="${EPREFIX}"/usr/include ) cmake-utils_src_configure } src_install() { mkdir -p "${BUILD_DIR}"/docs/html || die cmake-utils_src_install chmod 755 "${ED}"/usr/bin/*sh || die }
