[gentoo-commits] proj/sci:master commit in: sci-biology/vcflib/

[Andrew Ammerlaan]

commit:     c3873aa86ae47e19e52565bef9f69979f97b5a8e
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Tue Jan 25 09:24:43 2022 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Tue Jan 25 09:24:43 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=c3873aa8

sci-biology/vcflib: bump to 1.0.3

Need a proper release tarball (including the submodules) before
we can add keywords here

Package-Manager: Portage-3.0.30, Repoman-3.0.3
Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 .../vcflib/{vcflib-1.0.2.ebuild => vcflib-1.0.3.ebuild}   | 15 +++++----------
 1 file changed, 5 insertions(+), 10 deletions(-)

diff --git a/sci-biology/vcflib/vcflib-1.0.2.ebuild 
b/sci-biology/vcflib/vcflib-1.0.3.ebuild
similarity index 75%
rename from sci-biology/vcflib/vcflib-1.0.2.ebuild
rename to sci-biology/vcflib/vcflib-1.0.3.ebuild
index 272e69483..d4cf1e02f 100644
--- a/sci-biology/vcflib/vcflib-1.0.2.ebuild
+++ b/sci-biology/vcflib/vcflib-1.0.3.ebuild
@@ -1,18 +1,17 @@
-# Copyright 1999-2021 Gentoo Authors
+# Copyright 1999-2022 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
-EAPI=7
+EAPI=8
 
 inherit cmake toolchain-funcs
 
 DESCRIPTION="VCF/BED utils, Genotype Phenotype Association Toolkit (GPAT++)"
 HOMEPAGE="https://github.com/vcflib/vcflib";
-SRC_URI="https://github.com/vcflib/vcflib/releases/download/v${PV}/${P}-src.tar.gz";
-
-# vcflib is incorporated into several projects, such as freebayes
+SRC_URI="https://github.com/vcflib/vcflib/archive/refs/tags/v${PV}.tar.gz -> 
${P}.tar.gz"
 
 LICENSE="MIT-with-advertising"
 SLOT="0"
+# No proper release tarball for this release yet
 KEYWORDS=""
 IUSE="openmp"
 
@@ -22,10 +21,6 @@ DEPEND="
        sci-biology/tabixpp
 "
 RDEPEND="${DEPEND}"
-# contains bundled sci-biology/htslib ?
-# see also ./include for possible traces of other bundled sw
-
-S="${WORKDIR}/${PN}"
 
 src_prepare(){
        cmake_src_prepare
@@ -47,7 +42,7 @@ src_prepare(){
 src_compile(){
        mycmakeargs=(
                -DOPENMP="$(use_enable openmp)"
-               -DHTSLIB_LOCAL=NO
+               -DHTSLIB_LOCAL=ON
        )
        cmake_src_compile
 }