I'm trying to bump the version of commons-io from 2.6 to 2.10 (or any other value for now) and all is fine except for `org.geotools.coverage.io.netcdf.NetCDFMosaicReaderTest.testReHarvest()` on a Windows machine which fails by not reading the 2 new granules added to the NC file. I've checked the obvious things like files being held open or not overwritten etc and it isn't anything obvious that I can see (I'm sure it will be obvious once someone points it out :-) ). I've compared the log files of a linux and windows run but nothing jumps out at me.
16c16 < INFO: ACCEPTED: /tmp/junit8062632297122653609/nc_harvest4/ polyphemus_20130301_test.nc --- > INFO: ACCEPTED: C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\ polyphemus_20130301_test.nc 24c24 < INFO: found /tmp/junit8062632297122653609/nc_harvest4/datastore.properties --- > INFO: found C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\datastore.properties the file names are different! 36a37,38 > org.geotools.gce.imagemosaic.Utils loadMosaicProperties > INFO: Required key Levels not found. Windows seems to loop through this one more time (I suspect it is just a timing thing as my windows VM is slower) 38c40 < INFO: found /tmp/junit8062632297122653609/nc_harvest4/datastore.properties --- > INFO: found C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\datastore.properties 45c47 < target /tmp/junit8062632297122653609/nc_harvest4/ polyphemus_20130301_test.nc --- > target C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\ polyphemus_20130301_test.nc 47,48c49,50 < /tmp/junit8062632297122653609/nc_harvest4/polyphemus_20130301_test.nc.bak exists? true < nc2 /home/ian/code/geotools/modules/plugin/coverage-multidim/netcdf/target/test-classes/org/geotools/coverage/io/netcdf/test-data/ polyphemus_20130301_test_more_times.nc --- > C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\polyphemus_20130301_test.nc.bak exists? true > nc2 X:\geotools\modules\plugin\coverage-multidim\netcdf\target\test-classes\org\geotools\coverage\io\netcdf\test-data\ polyphemus_20130301_test_more_times.nc 51,52d52 < org.geotools.jdbc.JDBCDataStore getSQLTypeNames < WARNING: Fetching fields from Database Linux makes an extra (?) call to get the SQLTypeNames 54c54 < INFO: ACCEPTED: /tmp/junit8062632297122653609/nc_harvest4/ polyphemus_20130301_test.nc --- > INFO: ACCEPTED: C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\ polyphemus_20130301_test.nc Linux has 4 granules rather than windows 2: 59,60d58 < SimpleFeatureImpl:O3=[SimpleFeatureImpl.Attribute: the_geom<the_geom id=O3.5>=POLYGON ((4.9375 44.96875, 4.9375 50.96875, 14.9375 50.96875, 14.9375 44.96875, 4.9375 44.96875)), SimpleFeatureImpl.Attribute: location<location id=O3.5>=polyphemus_20130301_test.nc, SimpleFeatureImpl.Attribute: imageindex<imageindex id=O3.5>=2, SimpleFeatureImpl.Attribute: time<time id=O3.5>=2013-03-01 02:00:00.0] < SimpleFeatureImpl:O3=[SimpleFeatureImpl.Attribute: the_geom<the_geom id=O3.6>=POLYGON ((4.9375 44.96875, 4.9375 50.96875, 14.9375 50.96875, 14.9375 44.96875, 4.9375 44.96875)), SimpleFeatureImpl.Attribute: location<location id=O3.6>=polyphemus_20130301_test.nc, SimpleFeatureImpl.Attribute: imageindex<imageindex id=O3.6>=3, SimpleFeatureImpl.Attribute: time<time id=O3.6>=2013-03-01 03:00:00.0] I've attached the full logs if anyone else wants to look. I'm completely stumped by this but I don't really understand what the test is doing or what subtle failures it could have? Ian -- Ian Turton
org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter). log4j:WARN Please initialize the log4j system properly. org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Now indexing file indexer.properties org.geotools.imageio.netcdf.utilities.NetCDFUtilities <clinit> INFO: Value of Check Coordinate Plugins:null org.geotools.imageio.netcdf.utilities.NetCDFUtilities <clinit> INFO: Should check for coordinate handler plugins:false org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Now indexing file polyphemus_20130301_test.nc org.geotools.jdbc.JDBCDataStore getSQLTypeNames WARNING: Fetching fields from Database org.geotools.coverage.io.netcdf.NetCDFReader <init> INFO: ACCEPTED: /tmp/junit8062632297122653609/nc_harvest4/polyphemus_20130301_test.nc org.geotools.jdbc.JDBCDataStore getSQLTypeNames WARNING: Fetching fields from Database org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Creating final properties file org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.ImageMosaicReader initReaderFromURL INFO: found /tmp/junit8062632297122653609/nc_harvest4/datastore.properties org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.ImageMosaicReader initReaderFromURL INFO: filenameFilter AndFileFilter(NOT (NameFileFilter(indexer.properties)),AndFileFilter(NOT (NameFileFilter(datastore.properties)),AndFileFilter(FileFileFilter,SuffixFileFilter(.properties)))) org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.ImageMosaicReader initReaderFromURL INFO: found /tmp/junit8062632297122653609/nc_harvest4/datastore.properties org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.ImageMosaicReader initReaderFromURL INFO: filenameFilter AndFileFilter(NOT (NameFileFilter(indexer.properties)),AndFileFilter(NOT (NameFileFilter(datastore.properties)),AndFileFilter(FileFileFilter,SuffixFileFilter(.properties)))) org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. target /tmp/junit8062632297122653609/nc_harvest4/polyphemus_20130301_test.nc renamed? true /tmp/junit8062632297122653609/nc_harvest4/polyphemus_20130301_test.nc.bak exists? true nc2 /home/ian/code/geotools/modules/plugin/coverage-multidim/netcdf/target/test-classes/org/geotools/coverage/io/netcdf/test-data/polyphemus_20130301_test_more_times.nc org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Now indexing file polyphemus_20130301_test.nc org.geotools.jdbc.JDBCDataStore getSQLTypeNames WARNING: Fetching fields from Database org.geotools.coverage.io.netcdf.NetCDFReader <init> INFO: ACCEPTED: /tmp/junit8062632297122653609/nc_harvest4/polyphemus_20130301_test.nc org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Creating final properties file SimpleFeatureImpl:O3=[SimpleFeatureImpl.Attribute: the_geom<the_geom id=O3.3>=POLYGON ((4.9375 44.96875, 4.9375 50.96875, 14.9375 50.96875, 14.9375 44.96875, 4.9375 44.96875)), SimpleFeatureImpl.Attribute: location<location id=O3.3>=polyphemus_20130301_test.nc, SimpleFeatureImpl.Attribute: imageindex<imageindex id=O3.3>=0, SimpleFeatureImpl.Attribute: time<time id=O3.3>=2013-03-01 00:00:00.0] SimpleFeatureImpl:O3=[SimpleFeatureImpl.Attribute: the_geom<the_geom id=O3.4>=POLYGON ((4.9375 44.96875, 4.9375 50.96875, 14.9375 50.96875, 14.9375 44.96875, 4.9375 44.96875)), SimpleFeatureImpl.Attribute: location<location id=O3.4>=polyphemus_20130301_test.nc, SimpleFeatureImpl.Attribute: imageindex<imageindex id=O3.4>=1, SimpleFeatureImpl.Attribute: time<time id=O3.4>=2013-03-01 01:00:00.0] SimpleFeatureImpl:O3=[SimpleFeatureImpl.Attribute: the_geom<the_geom id=O3.5>=POLYGON ((4.9375 44.96875, 4.9375 50.96875, 14.9375 50.96875, 14.9375 44.96875, 4.9375 44.96875)), SimpleFeatureImpl.Attribute: location<location id=O3.5>=polyphemus_20130301_test.nc, SimpleFeatureImpl.Attribute: imageindex<imageindex id=O3.5>=2, SimpleFeatureImpl.Attribute: time<time id=O3.5>=2013-03-01 02:00:00.0] SimpleFeatureImpl:O3=[SimpleFeatureImpl.Attribute: the_geom<the_geom id=O3.6>=POLYGON ((4.9375 44.96875, 4.9375 50.96875, 14.9375 50.96875, 14.9375 44.96875, 4.9375 44.96875)), SimpleFeatureImpl.Attribute: location<location id=O3.6>=polyphemus_20130301_test.nc, SimpleFeatureImpl.Attribute: imageindex<imageindex id=O3.6>=3, SimpleFeatureImpl.Attribute: time<time id=O3.6>=2013-03-01 03:00:00.0]
org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter). log4j:WARN Please initialize the log4j system properly. org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Now indexing file indexer.properties org.geotools.imageio.netcdf.utilities.NetCDFUtilities <clinit> INFO: Value of Check Coordinate Plugins:null org.geotools.imageio.netcdf.utilities.NetCDFUtilities <clinit> INFO: Should check for coordinate handler plugins:false org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Now indexing file polyphemus_20130301_test.nc org.geotools.jdbc.JDBCDataStore getSQLTypeNames WARNING: Fetching fields from Database org.geotools.coverage.io.netcdf.NetCDFReader <init> INFO: ACCEPTED: C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\polyphemus_20130301_test.nc org.geotools.jdbc.JDBCDataStore getSQLTypeNames WARNING: Fetching fields from Database org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Creating final properties file org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.ImageMosaicReader initReaderFromURL INFO: found C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\datastore.properties org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.ImageMosaicReader initReaderFromURL INFO: filenameFilter AndFileFilter(NOT (NameFileFilter(indexer.properties)),AndFileFilter(NOT (NameFileFilter(datastore.properties)),AndFileFilter(FileFileFilter,SuffixFileFilter(.properties)))) org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.ImageMosaicReader initReaderFromURL INFO: found C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\datastore.properties org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. org.geotools.gce.imagemosaic.ImageMosaicReader initReaderFromURL INFO: filenameFilter AndFileFilter(NOT (NameFileFilter(indexer.properties)),AndFileFilter(NOT (NameFileFilter(datastore.properties)),AndFileFilter(FileFileFilter,SuffixFileFilter(.properties)))) org.geotools.gce.imagemosaic.Utils loadMosaicProperties INFO: Required key Levels not found. target C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\polyphemus_20130301_test.nc renamed? true C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\polyphemus_20130301_test.nc.bak exists? true nc2 X:\geotools\modules\plugin\coverage-multidim\netcdf\target\test-classes\org\geotools\coverage\io\netcdf\test-data\polyphemus_20130301_test_more_times.nc org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Now indexing file polyphemus_20130301_test.nc org.geotools.coverage.io.netcdf.NetCDFReader <init> INFO: ACCEPTED: C:\Users\ian\AppData\Local\Temp\junit17289880738954782938\nc_harvest4\polyphemus_20130301_test.nc org.geotools.gce.imagemosaic.ImageMosaicEventHandlers fireEvent INFO: Creating final properties file SimpleFeatureImpl:O3=[SimpleFeatureImpl.Attribute: the_geom<the_geom id=O3.3>=POLYGON ((4.9375 44.96875, 4.9375 50.96875, 14.9375 50.96875, 14.9375 44.96875, 4.9375 44.96875)), SimpleFeatureImpl.Attribute: location<location id=O3.3>=polyphemus_20130301_test.nc, SimpleFeatureImpl.Attribute: imageindex<imageindex id=O3.3>=0, SimpleFeatureImpl.Attribute: time<time id=O3.3>=2013-03-01 00:00:00.0] SimpleFeatureImpl:O3=[SimpleFeatureImpl.Attribute: the_geom<the_geom id=O3.4>=POLYGON ((4.9375 44.96875, 4.9375 50.96875, 14.9375 50.96875, 14.9375 44.96875, 4.9375 44.96875)), SimpleFeatureImpl.Attribute: location<location id=O3.4>=polyphemus_20130301_test.nc, SimpleFeatureImpl.Attribute: imageindex<imageindex id=O3.4>=1, SimpleFeatureImpl.Attribute: time<time id=O3.4>=2013-03-01 01:00:00.0]
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