Eliaaazzz opened a new pull request, #39823:
URL: https://github.com/apache/beam/pull/39823

   `GlobalWatermarkHolder.advance()` rebuilt the global watermark map from only 
the sources that had a queued update for the completed batch and overwrote the 
stored map with the result. A source that reported no progress in that batch 
lost its last known watermark, and since 
`SparkTimerInternals.forStreamFromSources` skips ids that are missing from the 
map, the input watermark of every consuming stage jumped ahead of the idle 
source, firing timers early and dropping its later elements as late.
   
   `computeNewWatermarks` now starts from the stored map and merges the 
per-source updates over it, so an idle source keeps its last watermark until it 
reports again. A source whose high watermark reached the end of time is done 
and holds nothing back, so it is not retained past the batch that completed it; 
without this, its finite synchronized processing time and low watermark would 
constrain consumers forever. Retained sources can disagree on the synchronized 
processing time, so `SparkTimerInternals` takes the slowest one instead of 
asserting equality. The stored map is also read once per `advance()` instead of 
once per updated source.
   
   Two `CreateStream` test scripts (`testFlattenedWithWatermarkHold`, 
`shouldTriggerProcessingTimeTimerWithSparseKey`) now advance their watermarks 
to infinity like the other scripts. Their scripts previously stopped at a 
finite watermark and the tests only terminated because the dropped source no 
longer held the global watermark back; with retention that stalled watermark 
would legitimately hold it back until the test timeout.
   
   `testWatermarkRetainedForSourceWithoutUpdate` fails on master with source 2 
absent from the map after the second `advance()`; `testCompletedSourceAgesOut` 
pins the report-then-age-out behavior.
   
   Fixes #39822.
   
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