If I understand correctly, the following has been done since the wrongly added 
binary files :
1. move of correct sources files
2. minor changes in source files

Could we handle 1. by making a script that tracks files move or redo the file 
move by hand? Can we handle 2. with a simple diff and then patch in a clean 
repository?

Have a nice day,

Steph

-- 
http://stephane.magnenat.net


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