It actually did add lgfortran, but the static version, as the
CMakeCache.txt file contains:
//Path to a library.
GFORTRAN_STATIC:FILEPATH=/usr/local/easybuild/.local/easybuild/software/GCCcore/5.4.0/lib64/libgfortran.a
I removed that line and added the following:
GFORTRAN_LIB:FILEPATH=/usr/local/easybuild/.local/easybuild/software/GCCcore/5.4.0/lib64/libgfortran.so
But I got the same error. Then, I ran cmake setting the
*ENABLE_BUILD_DYNAMIC* to *ON*, and got the following error:
Linking CXX executable gmsh
libGmsh.so.3.0.4: error: undefined reference to '_gfortran_concat_string'
libGmsh.so.3.0.4: error: undefined reference to '_gfortran_st_write'
libGmsh.so.3.0.4: error: undefined reference to
'_gfortran_transfer_character_write'
libGmsh.so.3.0.4: error: undefined reference to
'_gfortran_transfer_integer_write'
libGmsh.so.3.0.4: error: undefined reference to '_gfortran_st_write_done'
libGmsh.so.3.0.4: error: undefined reference to '_gfortran_stop_string'
Thanks
On 25/09/17 22:38, Christophe Geuzaine wrote:
On 25 Sep 2017, at 17:12, Juan A. Cordero Varelaq<[email protected]>
wrote:
Hi,
I'm getting the following error when building GMSH with make, after having succesfully
run cmake ( make -DCMAKE_INSTALL_PREFIX=/home/soft/pkgs
-DCMAKE_PREFIX_PATH="$EBROOTATLAS;/home/soft/pkgs/oce-0.18.2;$EBROOTGCC"
-DCMAKE_LIBRARY_PATH=$LD_LIBRARY_PATH -DENABLE_3M=ON -DENABLE_GRAPHICS=ON ..):
Seems like cmake forgot to add -lgfortran, required by your blas/lapack
libraries (atlas). You can add those manually in your CMakeCache file, or
specify your blas libs + gfortran lib directly with -DBLAS_LAPACK_LIBRARIES=...
Linking CXX executable gmsh
/usr/local/easybuild/.local/easybuild/software/ATLAS/3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1/lib/liblapack.a(dgesvd.o):dgesvd.f:function
dgesvd_: error: undefined reference to '_gfortran_concat_string'
/usr/local/easybuild/.local/easybuild/software/ATLAS/3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1/lib/liblapack.a(dgesvd.o):dgesvd.f:function
dgesvd_: error: undefined reference to '_gfortran_concat_string'
/usr/local/easybuild/.local/easybuild/software/ATLAS/3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1/lib/liblapack.a(dhseqr.o):dhseqr.f:function
dhseqr_: error: undefined reference to '_gfortran_concat_string'
/usr/local/easybuild/.local/easybuild/software/ATLAS/3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1/lib/liblapack.a(dormbr.o):dormbr.f:function
dormbr_: error: undefined reference to '_gfortran_concat_string'
/usr/local/easybuild/.local/easybuild/software/ATLAS/3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1/lib/libf77blas.a(xerbla.o):xerbla.f:function
xerbla_: error: undefined reference to '_gfortran_st_write'
/usr/local/easybuild/.local/easybuild/software/ATLAS/3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1/lib/libf77blas.a(xerbla.o):xerbla.f:function
xerbla_: error: undefined reference to '_gfortran_transfer_character_write'
/usr/local/easybuild/.local/easybuild/software/ATLAS/3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1/lib/libf77blas.a(xerbla.o):xerbla.f:function
xerbla_: error: undefined reference to '_gfortran_transfer_integer_write'
/usr/local/easybuild/.local/easybuild/software/ATLAS/3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1/lib/libf77blas.a(xerbla.o):xerbla.f:function
xerbla_: error: undefined reference to '_gfortran_st_write_done'
/usr/local/easybuild/.local/easybuild/software/ATLAS/3.10.2-GCC-5.4.0-2.26-LAPACK-3.6.1/lib/libf77blas.a(xerbla.o):xerbla.f:function
xerbla_: error: undefined reference to '_gfortran_stop_string'
I would appreciate any hint on solving this issue.
Thanks in advance
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