A problem with Gromacs-3.3: When I try ty run grompp using a.gro and a.top 
files, system says that number of coordinates in a.gro, 440, does not match 
number of coordinates in a.top, 0. That's strange because the both files were 
converted by pdb2gmx from one: a.pdb. Maybe it's necessary to specify number of 
atoms somewhere in a.top file?    
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