Thanks, but I did get some papers on the analysis done on POPC by MD but I did
not get any experimental papers showing the values so that I can compare
results of my MD with experimental data.
If anyone happens to have such papers please send them to me at [EMAIL
PROTECTED]> Date: Sat, 2 Feb 2008 07:20:54 -0500> From: [EMAIL PROTECTED]> To:
[email protected]> Subject: Re: [gmx-users] analysis of POPC> > Quoting
pragya chohan <[EMAIL PROTECTED]>:> > >> > hello users> > I am trying to do
analysis after bilayer simulation. I cannot get any> > experimental data on
POPC to validate my model with. Can the people who are> > working on same lipid
tell me some references and also what analysis should> > be done of the bilayer
before putting protein into it?> > I spent less than two minutes on Google and
found papers giving all sorts of> experimental parameters (density, area per
headgroup, bilayer thickness, etc). > I suggest you try the same.> > In terms
of the analysis you need to do, that is up to what question you are> asking and
why you are simulating this particular lipid. Refer to the> literature and find
papers by groups that have simulated proteins in POPC (and> perhaps proteins in
membranes in general) to determine what they have found> relevant, and apply
the same to your system.> > -Justin> > >
_________________________________________________________________> > Tried the
new MSN Messenger? It’s cool! Download now.> >
http://messenger.msn.com/Download/Default.aspx?mkt=en-in> > > >
========================================> > Justin A. Lemkul> Graduate Research
Assistant> Department of Biochemistry> Virginia Tech> Blacksburg, VA> [EMAIL
PROTECTED] | (540) 231-9080>
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/> >
========================================>
_______________________________________________> gmx-users mailing list
[email protected]> http://www.gromacs.org/mailman/listinfo/gmx-users>
Please search the archive at http://www.gromacs.org/search before posting!>
Please don't post (un)subscribe requests to the list. Use the > www interface
or send it to [EMAIL PROTECTED]> Can't post? Read
http://www.gromacs.org/mailing_lists/users.php
_________________________________________________________________
Post free property ads on Yello Classifieds now! www.yello.in
http://ss1.richmedia.in/recurl.asp?pid=221
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
