SWAPNA wrote: > Dear gmx users, > I am using g_anaeig to filter my traj along the first eigenvector. > > 'g_anaeig -b 5000 -f 15000 -v eigenvec.trr -f calpha.tpr -s calpha.xtc > -first 1 -last 1 -filt alongeigvec1 -dt 100' > 5000ps to 15000ps has equilibriated trajectory. So I am using that to > perform essential dynamics. > > When I do this it gives segmentation fault as below > ------------ > Reading frame 0 time 0.000 Segmentation fault > -----------------
The -f flag doesn't accept a number. > When I give -b 0 -e 15000 it works without any problem. > But it stops reading frames before the end time is 15000. > > ----------- > Reading frame 29000 time 14500.001 > ---------- > > can I get filtered trajectory for -b 5000 -f 15000 ? No, but you might be able to get one for -b 5000 -e 15000. Use gmxcheck on the trajectory to see what it contains. Mark _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
