I suggest reading the following:
http://wiki.gromacs.org/index.php/Errors#Residue_.27XXX.27_not_found_in_residue_topology_database
/Erik
samad ahadian skrev:
Hello,
I am new user of Gromacs. I did a pdb2gmx command on my pdb file. I got an
error below:
"Residue 'XXX' not found in residue topology database"
I know that I blindly made my pdb file using Materials Studio 4.2. Let me know
there is a special software to make a pdb file? Thank you in advance for your
response.
Regards,
Samad
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--
-----------------------------------------------
Erik Marklund, PhD student
Laboratory of Molecular Biophysics,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: +46 18 471 4537 fax: +46 18 511 755
[EMAIL PROTECTED] http://xray.bmc.uu.se/molbiophys
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