Ricardo Soares skrev:
Hello everyone!

I have a particular amino acid sequence and I wanna build a custom-shaped protein and make it a pdb file (I'm talking about non-realistic forms, like squares or a full extended chain). Can anyone indicate me some software for this task?

Thanx!

I don't build much myself, but I use pymol a bit and I know it is capable of building stuff. It is also scriptable and pythonable so automatic generation of a structure from a sequence ought to be doable. And it's free.

/Erik

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Erik Marklund, PhD student
Laboratory of Molecular Biophysics,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,    75124 Uppsala, Sweden
phone:    +46 18 471 4537        fax: +46 18 511 755
[EMAIL PROTECTED]    http://xray.bmc.uu.se/molbiophys

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