Shirin Awasthi wrote:
hi.
I have finished an mdrun of my protein upto position restraints step.
now i want to obtain the output in .pdb format.
what is the exact command for that?
Use editconf to transform the .gro into .pdb; if you want to transform a
trajectory, use trjconv.
-Justin
--
Shirin Awasthi
M.Tech (CSB)
Center for Computational Biology and Bioinformatics,
School of Information Technology,
Jawaharlal Nehru University,
New Delhi,
110067
INDIA.
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--
========================================
Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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