Dear Justin, could you please write what environmental changes you made to MPICC.. I tried to alter the profile, but it is rejecting all of them..
Bhanu. On 20/05/2009, Bhanu <[email protected]> wrote: > Thanks Justin, will try your suggestion.. > > 2009/5/20 Justin A. Lemkul <[email protected]>: > > > > > > Bhanu wrote: > >> > >> I tried to install Gromacs on my Core2Quad pc with the command > >> > >> ./configure --enable-mpi --disable-nice --program-suffix="_mpi" > >> > >> it is showing the following error result: > >> > >> [sand...@bhanu gromacs-4.0.3]$ ./configure --enable-mpi --disable-nice > >> --program > >> -suffix="_mpi" > >> checking build system type... i686-pc-linux-gnu > >> checking host system type... i686-pc-linux-gnu > >> checking for a BSD-compatible install... /usr/bin/install -c > >> checking whether build environment is sane... yes > >> /bin/sh: /home/sandaka/Desktop/all: No such file or directory > >> configure: WARNING: `missing' script is too old or missing > >> checking for a thread-safe mkdir -p... /bin/mkdir -p > >> checking for gawk... gawk > >> checking whether make sets $(MAKE)... yes > >> checking how to create a ustar tar archive... gnutar > >> checking for cc... cc > >> checking for C compiler default output file name... a.out > >> checking whether the C compiler works... yes > >> checking whether we are cross compiling... no > >> checking for suffix of executables... > >> checking for suffix of object files... o > >> checking whether we are using the GNU C compiler... yes > >> checking whether cc accepts -g... yes > >> checking for cc option to accept ISO C89... none needed > >> checking for style of include used by make... GNU > >> checking dependency style of cc... gcc3 > >> checking dependency style of cc... gcc3 > >> checking for mpxlc... no > >> checking for mpicc... mpicc > >> checking whether the MPI cc command works... yes > >> checking for catamount... no > >> checking how to run the C preprocessor... mpicc -E > >> checking whether mpicc accepts -O3... yes > >> checking whether mpicc accepts -funroll-all-loops... yes > >> checking whether mpicc accepts -O3 -fomit-frame-pointer > >> -finline-functions -Wall -Wno-unused -funroll-all-loops... yes > >> checking for grep that handles long lines and -e... /bin/grep > >> checking for egrep... /bin/grep -E > >> checking for ANSI C header files... no > >> checking for sys/types.h... yes > >> checking for sys/stat.h... yes > >> checking for stdlib.h... yes > >> checking for string.h... yes > >> checking for memory.h... yes > >> checking for strings.h... yes > >> checking for inttypes.h... yes > >> checking for stdint.h... yes > >> checking for unistd.h... yes > >> checking whether byte ordering is bigendian... no > >> checking for int... yes > >> checking size of int... configure: error: cannot compute sizeof (int) > >> See `config.log' for more details. > >> > >> Am attaching the config.log file herein. I've Openmpi and fftw already > >> installed and in the path.. Couldn't understand what is the error! > >> > >> > > > > Have a look at this thread: > > > > http://www.gromacs.org/pipermail/gmx-users/2008-November/037935.html > > > > -Justin > > > >> > >> > >> > >> > >> ------------------------------------------------------------------------ > >> > >> _______________________________________________ > >> gmx-users mailing list [email protected] > >> http://www.gromacs.org/mailman/listinfo/gmx-users > >> Please search the archive at http://www.gromacs.org/search before posting! > >> Please don't post (un)subscribe requests to the list. Use the www > >> interface or send it to [email protected]. > >> Can't post? Read http://www.gromacs.org/mailing_lists/users.php > > > > -- > > ======================================== > > > > Justin A. Lemkul > > Ph.D. Candidate > > ICTAS Doctoral Scholar > > Department of Biochemistry > > Virginia Tech > > Blacksburg, VA > > jalemkul[at]vt.edu | (540) 231-9080 > > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > > > ======================================== > > _______________________________________________ > > gmx-users mailing list [email protected] > > http://www.gromacs.org/mailman/listinfo/gmx-users > > Please search the archive at http://www.gromacs.org/search before posting! > > Please don't post (un)subscribe requests to the list. Use the www interface > > or send it to [email protected]. > > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > > > > > > -- > Never lose hope on the person you love.... they maybe the reason your > heart aches today... but they are definitely the reason your heart > beats.... : COPIED FROM GMAIL CUSTOM MSGS. > -- Never lose hope on the person you love.... they maybe the reason your heart aches today... but they are definitely the reason your heart beats.... : COPIED FROM GMAIL CUSTOM MSGS. _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
