chandrabhan seniya wrote:

hello sir..
i have a problem in running pdb2gmx command
fatal error is : atom c1 in residue na+ 369 not found in rtp entry with 1 atom while soting atoms

Please use a descriptive email subject, and a full description of your problem. Copied and pasted inputs and outputs are much more useful to everyone than mistyped or misremembered versions.

Please check out the listing of errors in the wiki, especially http://wiki.gromacs.org/index.php/Errors#Residue_.27XXX.27_not_found_in_residue_topology_database

Mark
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