On Mon, Jun 29, 2009 at 12:54 PM, Manik Mayur <[email protected]> wrote:
> Hi, > I am trying to install GROMACS-4.0.5, but while making mpirun with the > option --enable-mpi it gives the following sets of errors: > read "making mdrun" ../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to > `ah_find' > ../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to > `lam_ksignal' > ../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to > `lam_arr_append' > ../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to > `ah_delete' > ../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to > `lam_errorstr' > ../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to > `lam_ssi_cr_did' > ../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to > `lam_rtrnameget' > ../gromacs-4.0.5/src/gmxlib/.libs/libgmx_mpi.so: undefined reference to > `lam_mutex_trylock' > ................... > ................... > > The important thing to note is that I have successfully compiled and > installed mpi version of mdrun on the same machine, for GROMACS-4.0.4. > What am I missing here? > Thanks, > > Manik Mayur > Graduate student > Microfluidics Lab > Dept. of Mechanical Engg. > IIT Kharagpur > INDIA >
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