Hi Justin, Thanks for your quick reply. It turns out that the stuff I posted was malformed, as you pointed out, but it was a desperate attempt after a number of goes, and I got that one wrong. I tried again using:
-sh-3.2$ export CPPFLAGS=-I/hpc/software/packages/chemistry/fftw/include -sh-3.2$ export LDFLAGS=-L/hpc/sofware/packages/chemistry/fftw/lib -sh-3.2$ echo $CPPFLAGS -I/hpc/software/packages/chemistry/fftw/include -sh-3.2$ echo $LDFLAGS -L/hpc/sofware/packages/chemistry/fftw/lib Is still got: checking for fftw3.h... yes checking for main in -lfftw3f... no configure: error: Cannot find fftw3f library exactly as before. I am kicking myself for posting the malformed stuff. Any ideas? Cheers, **************************************** Graham Kettlewell Research assistant Centre for Atmospheric Chemistry University of Wollongong [email protected] Tel: (61 2) 4221 5120 Fax: (61 2) 4221 4287 Mob: 0414 309 524 **************************************** -----Original Message----- From: [email protected] [mailto:[email protected]] On Behalf Of Justin A. Lemkul Sent: Tuesday, 30 June 2009 1:25 PM To: [email protected]; Discussion list for GROMACS users Subject: Re: [gmx-users] Installation with non standard location of fftw3 Justin A. Lemkul wrote: >> -sh-3.2$ export CPPFLAGS=-I/hpc/software/packages/chemistry/fftw/include >> -sh-3.2$ export LDFLAGS=-I/hpc/software/packages/chemistry/fftw/lib >> > > You want this line to contain -L, not -I. That may have been a bit unclear; the LDFLAGS line should use -L, your CPPFLAGS line is fine. -Justin -- ======================================== Justin A. Lemkul Ph.D. Candidate ICTAS Doctoral Scholar Department of Biochemistry Virginia Tech Blacksburg, VA jalemkul[at]vt.edu | (540) 231-9080 http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin ======================================== _______________________________________________ gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php _______________________________________________ gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
