Nimesh Jain wrote:
Hi,
Does anyone know if there is a way to put a molecule back in the pbc box
in gromacs. I am visualizing my sims in vmd and the molecule keeps going
out of the box. Is it normal or an artifact in vmd, is there a way to
put the molecule back in the box? please let me know.
FAQ #11:
http://www.gromacs.org/Documentation/FAQs
-Justin
Thanks,
Nimesh
--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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