Hi,
I'm a complete novice when it comes to using any kind of command
prompt based programmes and hadn't even heard of Linux until my
supervisor wanted me to use gromacs ... so needless to say I'm running
into a few problems!!
I've managed to perform all the generic energy minimisations etc on my
protein (basically I can do everything that has been spoon fed to me
on the tutorial), but now I want to begin simulating AFM pulling
experiments. I've printed (and bound!) the entire manual but I'm
still coming up against problems with understanding how I go about
running the AFM simulations.
Does anyone have a basic syntax they have used to perform a similar
simulation so I can work from there and figure out what I need to put
where?
Also, do I need to create any specific input files for these simulations?
Thanks so much for your help with this...
A rather inept gromacs user (Natalie!)
xxx
--
gmx-users mailing list gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
