Problem solved,
I've recompiled gromacs with option adding "-L/usr/lib -ldl" and after
setting the VMD_PLUGIN_PATH environment variable
gromacs works.
On 30/09/2010 16:03, Roland Schulz wrote:
Hi,
Do you get any other messages before that last message? It might tell
you that you have to set the VMD_PLUGIN_PATH.
GROMACS has to be compiled with dlopen support for this to work. Did
you compile with cmake or configure? Could you please look into the
config.h and see whether GMX_DLOPEN is set?
Roland
On Thu, Sep 30, 2010 at 9:30 AM, Francesco Oteri
<[email protected] <mailto:[email protected]>> wrote:
Dear all,
I would like to know how to analyze dcd trajectory in gromacs.
I successfully installed gromacs, but if I use
trjconv -f neck.dcd -s ../neck_model.pdb -o next.xtc
I obtain the following error:
Fatal error:
Not supported in read_first_frame: neck.dcd
Any suggestion?
--
gmx-users mailing list [email protected]
<mailto:[email protected]>
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [email protected]
<mailto:[email protected]>.
Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
--
ORNL/UT Center for Molecular Biophysics cmb.ornl.gov <http://cmb.ornl.gov>
865-241-1537, ORNL PO BOX 2008 MS6309
--
gmx-users mailing list [email protected]
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [email protected].
Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
