On Nov 24, 2010, at 4:04 PM, Rossella Noschese wrote: > Hi all, I'm trying to install gromacs.4.5.3 on fedora 13. > I followed the instruction on the website, I completed my make install and > this was the output: > GROMACS is installed under /usr/local/gromacs. > Make sure to update your PATH and MANPATH to find the > programs and unix manual pages, and possibly LD_LIBRARY_PATH > or /etc/ld.so.conf if you are using dynamic libraries. > > Please run "make tests" now to verify your installation. > > If you want links to the executables in /usr/local/bin, > you can issue "make links" now. > > Since I understood I could set my environment later, I directly complete my > make links. > Then I added in my .bashrc the line: > source /usr/local/gromacs/bin/GMXRC.bash > > and it was added to mi $PATH and also my $MANPATH seems to be right > (/usr/local/gromacs/share/man:) > > When I type GMXRC in the shell it comes: GMXRC is for setting the paths to your Gromacs executables. You can do that by typing "source GMXRC", but this you have already done in your bashrc, so everything is already set up and fine! You will find all the Gromacs programs at your fingertips, e.g. "mdrun -h" prints out help for the main MD program.
Carsten > [rosse...@topolone ~]$ GMXRC > /usr/local/gromacs/bin/GMXRC: line 35: return: can only `return' from a > function or sourced script > /usr/local/gromacs/bin/GMXRC: line 44: CSH:: command not found > /usr/local/gromacs/bin/GMXRC.csh: line 8: syntax error near unexpected token > `setenv' > /usr/local/gromacs/bin/GMXRC.csh: line 8: `if (! $?LD_LIBRARY_PATH) setenv > LD_LIBRARY_PATH ""' > > Is there anyone that could help me? > > > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [email protected]. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
