On 4/01/2011 11:38 PM, ahmet yıldırım wrote:
Dear Mark,

I will do by using the g_analyze tool but I do not know how to use it.

There's a section in Appendix D of the manual for each tool, or you can use the -h argument to the tool to get the same information.

Either way, you haven't got the right tool. Hint: it's a "protein specific analysis"

Mark


Thanks

2011/1/4 Mark Abraham <[email protected] <mailto:[email protected]>>

    On 4/01/2011 8:33 PM, ahmet yıldırım wrote:

        Hi,

        How can I calculate the percentages (alpha helix, beta sheet,
        coil ...) of secondary structure?


    Look in manual section 7.4 for a suitable tool.

    Mark
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Ahmet YILDIRIM

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