Dear Justin and Mark, Problem solved.Thanks for your helps
I copied to the directory /usr/share/gromacs/top it (in.m2p). r...@ubuntu:/home/ab/Desktop# cp in.m2p /usr/share/gromacs/top 05 Ocak 2011 13:45 tarihinde Justin A. Lemkul <[email protected]> yazdı: > > > ahmet yıldırım wrote: > >> Dear Mark, >> >> I am using the Gromacs on the Ubuntu for month but have not encountered >> any problems.I did a search in the file system of Ubuntu. I do not have a >> GMXLIB folder in a file system. >> >> What should I do? >> >> > If you're telling xpm2ps to use in.m2p, that file has to exist somewhere. > The error message is telling you that it does not exist in the working > directory (i.e., the directory where you're issuing the command), or the > standard Gromacs library directory ( > http://www.gromacs.org/Documentation/Terminology/Environment_Variables#GMXLIB > ). > > If you tell any Gromacs tool to use certain input, it has to exist; Gromacs > isn't going to magically create all the proper files for you. > > -Justin > > 05 Ocak 2011 10:42 tarihinde Mark Abraham <[email protected]<mailto: >> [email protected]>> yazdı: >> >> >> On 5/01/2011 7:37 PM, ahmet yıldırım wrote: >> >> Dear users, >> >> I receive the following error when I entered the command "xpm2ps >> -f ss.xpm -o ss.eps -di in.m2p" >> Fatal error: >> Library file in.m2p not found in current dir nor in default >> directories. >> (You can set the directories to search with the GMXLIB path >> variable) >> >> I am using the Gromacs 4.05 on the Ubuntu 9.1 Operation System. >> I installed the Gromacs from Synaptic Package Manager. >> I used echo $GMXDATA but it did not show anything. The pdb2gmx, >> g_gyrate,...etc files are in the directory /usr/bin/. >> The GMXRC file is in the directory >> /usr/share/gromacs/shell-specific. >> >> >> Are you following these instructions? >> >> http://www.gromacs.org/Downloads/Installation_Instructions#Getting_access_to_GROMACS_after_installation >> >> Mark >> -- gmx-users mailing list [email protected] >> <mailto:[email protected]> >> >> http://lists.gromacs.org/mailman/listinfo/gmx-users >> Please search the archive at >> http://www.gromacs.org/Support/Mailing_Lists/Search before posting! >> Please don't post (un)subscribe requests to the list. Use the www >> interface or send it to [email protected] >> <mailto:[email protected]>. >> >> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >> >> >> >> >> -- >> Ahmet YILDIRIM >> >> > -- > ======================================== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > MILES-IGERT Trainee > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to [email protected]. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- Ahmet YILDIRIM
-- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
