On Tue, Mar 8, 2011 at 2:53 PM, Esztermann, Ansgar < [email protected]> wrote:
> > On Mar 8, 2011, at 12:00 , mohsen ramezanpour wrote: > > > >> > Besides when I used the following command I get an executeable Error: > >> > mpirun -np 8 mdrun_mpi -deffnm output & > >> > >> What is the error message? > > > > the Error is: > > Failed to find the following executable: > > > > Host: compute-0-4.local > > Executable: mdrun_mpi > > > > Cannot continue. > > Is mdrun_mpi available on compute-0-4? If so, it's just a matter of using > the right path: your shell knows where to look for the executable, but > mpirun does not. Try > > Sorry,You are right.There is not any mdrun_mpi on Nodes. Thank you. Besides there are not any followings on nodes: mdrun_mpi mdrun_mpi_d.openmpi mdrun_d mdrun_mpi_d mdrun_mpi.openmpi mpiexec.openmpi mpirun.openmpi Do I need to install some of these on cluster to be able run mdrun on all Nodes? Thanks in advance for your guidances > mpirun -np 8 `which mdrun_mpi` -deffnm output & > > instead. Note the "backticks" (`). > > A. > -- > Ansgar Esztermann > DV-Systemadministration > Max-Planck-Institut für biophysikalische Chemie, Abteilung 105 > > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [email protected]. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
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