Dear All I used mdrun for generating NVT It crashed and massage was:
Trying to get md5sum: nvt-1.trr: Stale NFS file handle Trying to get md5sum: nvt-1.edr: Stale NFS file handle ------------------------------------------------------- Program mdrun, VERSION 4.5.3-dev-20110310-a52f8-dirty Source code file: /home/mohsen/src/gromacs/src/gromacs/gmxlib/checkpoint.c, line: 1287 File input/output error: Cannot fsync 'nvt-1.trr'; maybe you are out of disk space or quota? For more information and tips for troubleshooting, please check the GROMACS website at http://www.gromacs.org/Documentation/Errors But I have enough space on my cluster! it is excellent because I run 5 program with the same nvt.mdp file and all of them gave above error. Of course 3 of them ended succesfully although they gave the same error too. Is the problem from my mdp file? Thanks in advance
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