Dear All, I created .pdb file for dna using gabedit. But when I try to create the topology file I get this error: Fatal error: There is a dangling bond at at least one of the terminal ends and the force field does not provide terminal entries or files. Edit a .n.tdb and/or .c.tdb file.
Output of pdb2gmx, and my input pdb files are attached. Could anyone please suggest why this is happening? Thanks, Majid
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