vidhya sankar wrote:
dear justin,
Thank u for your atonce reply.
I know that there is no relation between structure obtained by trjconv
and g_morph.
But the time factor for each pdb as TITLE frame t= 0.091 .
on which basis this time factor present in interm.pdb files
because g_morph tool does not take any time as input. it takes only two
pdb as input
It is meaningless. With 11 intermediates (the default), 1/11 = 0.091. trjconv
will output the time read in from the frame in the trajectory.
-Justin
--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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