On 28/12/2011 6:59 PM, leila karami wrote:
Dear Mark

thanks for your reply.

I have a general questions:

For what parameters I can use g_analyze -av average.xvg -errbar stddev -f 
*.xvg?//


//*** What quantity do you wish to show with an error bar?

I want to show output from g_dist with an error bar.

That's not a quantity. You need to be able to say something like "I want to show with an error bar twice the standard error of the average distance between the terminal alpha-carbon atoms over my five simulations". Once you can do that you can start to construct commands with g_dist and g_analyze to achieve it.

Mark
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