---------- Forwarded message ---------- From: vineetha mandlik <[email protected]> Date: Sat, Apr 21, 2012 at 9:22 PM Subject: help To: [email protected]
Respected Sir/Madam I am new to gromacs and on giving the grompp command after genion command I am getting the following error: Even after running the genion command and adding 4 Na+ ions before the grompp command i still get Note: the system has non zero charge: -4.99998e+0.0 and then this error.. Number of coordinates in coordinate file (x_b4em.gro,24736) does not match topology (x.top,247535). so can you help me in resolving this issue.. Any help in this regard will be highly appreciated.
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