On 1/28/13 8:30 AM, James Starlight wrote:
Justin,
Below you can see graph representation of my system after energy
minimisation ( that case system was filled up with tip3p water using
genbox with slightly increased vdw for C atom ( to 2nm) to prevent
I'm assuming you mean 2 Angstrom?
water movement into the membrane.
http://img42.imageshack.us/img42/7213/b2armembrane.png
I can't exactly guess what the dimensions of the system are, but it seems to me
that the z-dimension is not 10 nm based on a rough guess of how many lipids are
present.
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
--
gmx-users mailing list [email protected]
http://lists.gromacs.org/mailman/listinfo/gmx-users
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
* Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [email protected].
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
