В письме от 15 мая 2013 08:41:14 пользователь Андрей Гончар написал: > I know, but on target machine there is a gcc compilator version 4.1, and on > gromacs site they told that this version is broken and 4.5 should used > instead. So I try to compile it on machine with 4.5 version of gcc >
You can build gcc on target machine for example. also to simplify build you can take a look a http://prefix.gentoo.org for example. > > 2013/5/15 Alexey Shvetsov <[email protected]> > > > В письме от 15 мая 2013 00:11:49 пользователь Андрей Гончар написал: > > > Hi. I'm trying to static compile gromacs from source, everything goes > > > > well, > > > > > but when I > > > move it to another machine and try to launch mdrun I got a message: > > > > > > mdrun: error while loading shared libraries: libfftw3f.so.3: cannot open > > > shared object file: No such file or directory > > > > > > I run ./configure with the following options: > > > > > > ./configure --prefix=$PREF --enable-all-static --with-x=no --enable-mpi > > > --without-xml --disable-shared --with-fft=fftw3 > > > > > > The goal is to compile gromacs on one computer and to use it on another. > > > > I > > > > > haven't root privileges on another machine so I decided to make a > > > statically linked instance of gromacs, copy it to another computer and > > > > use > > > > > it from my home directory. > > > > You dont need root privileges to install gromacs for example in > > ${HOME}/usr > > also its good idea to build gromacs on target machine > > -- > > Best Regards, > > Alexey 'Alexxy' Shvetsov > > Petersburg Nuclear Physics Institute, NRC Kurchatov Institute, > > Gatchina, Russia > > Department of Molecular and Radiation Biophysics > > Gentoo Team Ru > > Gentoo Linux Dev > > mailto:[email protected] > > mailto:[email protected] > > mailto:[email protected] > > -- > > gmx-users mailing list [email protected] > > http://lists.gromacs.org/mailman/listinfo/gmx-users > > * Please search the archive at > > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > > * Please don't post (un)subscribe requests to the list. Use the > > www interface or send it to [email protected]. > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- Best Regards, Alexey 'Alexxy' Shvetsov Petersburg Nuclear Physics Institute, NRC Kurchatov Institute, Gatchina, Russia Department of Molecular and Radiation Biophysics Gentoo Team Ru Gentoo Linux Dev mailto:[email protected] mailto:[email protected] mailto:[email protected]
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