The public version of heron_load/naaccr*.sql is out of date. Things are moving more quickly than our monthly publishing rhythm, so MultiSite dev access (i.e. elephant) is important to get recent work on #358<https://informatics.gpcnetwork.org/trac/Project/ticket/358>. <https://informatics.gpcnetwork.org/trac/Project/ticket/358>
We have never updated TOPO, MORPH, etc.; we grabbed them just once. (I have a TODO on a wiki page about grabbing more recent stuff, but have not got even as far as opening a ticket.) -- Dan ________________________________ From: Wanta Keith M [[email protected]] Sent: Tuesday, November 17, 2015 10:04 AM To: Nathan Graham; Dan Connolly Cc: [email protected] Subject: RE: NAACCR python code Nathan – That’s fine if you promote the thread to GPC-DEV. I’m not making any huge changes currently, but we’ll have to maintain this code overtime, so it’ll be important to get a group opinion on some things, especially if we will be relying on it for the PCORI/GPC breast cancer survey(s). I found your code, but thank you for the additional links. I’m curious how often KUMC is updating the TOPO, MORPH* and ICD-O codes? As for elephant, I’m not sure I have time for it, but feel free to add me. Keith From: Nathan Graham [mailto:[email protected]] Sent: Tuesday, November 17, 2015 9:25 AM To: Wanta Keith M; Dan Connolly Subject: RE: NAACCR python code Keith, Can we promote this thread to the gpc-dev mailing list? Others may have input/benefit from the conversation. Are you looking for the code that loads up the MORPH*/T_* tables? If so, maybe GPC ticket 405 comment 1<https://informatics.gpcnetwork.org/trac/Project/ticket/405#comment:1> has what you need. We currently don’t have the NAACCR staging code that builds these tables published (we haven’t thought too hard about licensing, etc.). I think we could send it to you though. Or, the code is in our shared repository on elephant (see MultiSiteDev<https://informatics.gpcnetwork.org/trac/Project/wiki/MultiSiteDev>)…it looks like you’re not set up on elephant as of now. As for the ETL code, see heron_load/naaccr_*.sql<https://informatics.kumc.edu/work/browser/heron_load>. -- Nathan From: Wanta Keith M [mailto:[email protected]] Sent: Friday, November 13, 2015 2:30 PM To: Nathan Graham; Dan Connolly Subject: NAACCR python code Hey guys, I’m doing a code review on our NAACCR conversion. Where is your python and SQL code located for NAACCR? Is it available online? Thanks, Keith
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