What else for tomorrow? The agenda is pretty full, so things near the bottom are at-risk. If any of them is urgent, let us know.
* gpc-dev 24 May shared notes<https://docs.google.com/document/d/10XFfUufhPA5-GYITN1RXLrfepvh-egr7zUED5M8ZtGU/edit>; scribe: MCRF current agenda proposal: ________________________________ 1. Convene, take roll, review records and plan next meeting * Meeting ID and access code: 817-393-381<https://global.gotomeeting.com/meeting/join/817393381>; call +1 (571) 317-3131 * roll: all 12 DevTeams<https://informatics.gpcnetwork.org/trac/Project/wiki/DevTeams> represented? KUMC, CMH, UIOWA, WISC, MCW, MCRF, UMN, UNMC, UTHSCSA, UTSW, MU, IU Reminder - put institution after your name in GoToMeeting preferences * today's scribe: MCRF * reminders from current work by owner site<https://informatics.gpcnetwork.org/trac/Project/report/11>: * MU: #509 (geocoding ETL code: establish shared version control repository)<https://informatics.gpcnetwork.org/trac/Project/ticket/509> * comments on the agenda? on last week’s notes (#12<https://informatics.gpcnetwork.org/trac/Project/ticket/12>)? * recent tickets opened/closed<https://informatics.gpcnetwork.org/trac/Project/timeline> FYI (note also recent ticket comments report<https://informatics.gpcnetwork.org/trac/Project/report/13>): * #502 (PCORnet Menu-Driven Queries (MDQ) - MCRF experience) closed<https://informatics.gpcnetwork.org/trac/Project/ticket/502#comment:7> * #505 (share DataBuilder work-alike in use at UIOWA) closed<https://informatics.gpcnetwork.org/trac/Project/ticket/505#comment:2> * #377 (Social Security Death Master file: regular updates to GPC sites) closed<https://informatics.gpcnetwork.org/trac/Project/ticket/377#comment:34> * #408 (collect Enrollment numbers for 2016 H2 interim report (milestone 2.3.5)) reopened<https://informatics.gpcnetwork.org/trac/Project/ticket/408#comment:3> * Next Meeting: 31 May; scribe? * Note LRU schedule<https://informatics.gpcnetwork.org/trac/Project/ticket/12#comment:92>, which nominates IU, UNMC, … 2. Milestone:data-domains3<https://informatics.gpcnetwork.org/trac/Project/milestone/data-domains3> CDM v3 prep-to-research readiness * #473<https://informatics.gpcnetwork.org/trac/Project/ticket/473> PCORnet CDMv3 SAS prep-to-research Readiness <https://informatics.gpcnetwork.org/trac/Project/ticket/473>“All sites other than KUMC, MCRF, and MCW must complete the Data Characterization Questions and Answers … The response is due to DRN OC by Friday, May 20” Done; any questions? 3. Milestone:antibiotic-study-data<https://informatics.gpcnetwork.org/trac/Project/milestone/antibiotic-study-data>, milestone:bariatric-study-data<https://informatics.gpcnetwork.org/trac/Project/milestone/bariatric-study-data> * #492<https://informatics.gpcnetwork.org/trac/Project/ticket/492> How to Build SAS CDM v3 Medication Tables <https://informatics.gpcnetwork.org/trac/Project/ticket/492>2nd reviewer for ABX functional spec? How is it going, Keith? ETA? * #103<https://informatics.gpcnetwork.org/trac/Project/ticket/103> subject of observation (e.g. maternal findings relevant to child) <https://informatics.gpcnetwork.org/trac/Project/ticket/103>Bos May 2015: “The basic algorithm (fuzzy matching algorithm on patent contact info to identify siblings) will be shared with gpc-dev soon.” * #510<https://informatics.gpcnetwork.org/trac/Project/ticket/510> Bariatric Query Specification and Timeline<https://informatics.gpcnetwork.org/trac/Project/ticket/510> - what is the task? Bariatric technical specs, functional specs: next steps? <http://listserv.kumc.edu/pipermail/gpc-dev/2016q2/002875.html>Obesity Studies Query Process and Timeline <http://listserv.kumc.edu/pipermail/gpc-dev/2016q2/002877.html>Any stuff we don’t already have tickets/milestones for? What’s a useful due date to track? (after May 31 IRB target) 4. Milestone:adaptable-accrual<https://informatics.gpcnetwork.org/trac/Project/milestone/adaptable-accrual> * ADAPTABLE Feedback Request<http://listserv.kumc.edu/pipermail/gpc-dev/2016q2/002907.html> Swander, Lena C 5. Milestone:cohort-char1<https://informatics.gpcnetwork.org/trac/Project/milestone/cohort-char1> Height/Weight due 30 May * Ticket #512 (collate Health and Medical Research Family Survey (HMRFS) results) created<https://informatics.gpcnetwork.org/trac/Project/ticket/512> * New ETA for #379<https://informatics.gpcnetwork.org/trac/Project/ticket/379> Link EHR data to Health and Medical Research Family Survey (HMRFS) 2 results<https://informatics.gpcnetwork.org/trac/Project/ticket/379>? Is that still the target? 6. Milestone:cohort-char-bc-db<https://informatics.gpcnetwork.org/trac/Project/milestone/cohort-char-bc-db> due May 30 * #448<https://informatics.gpcnetwork.org/trac/Project/ticket/448> all diagnoses and procedures for breast cancer cohort <https://informatics.gpcnetwork.org/trac/Project/ticket/448>Seems to work well at KUMC (modulo #511); Recruit another site to try it. * #511 (HERON CDM misses CONDITION table) created<https://informatics.gpcnetwork.org/trac/Project/ticket/511> * #471<https://informatics.gpcnetwork.org/trac/Project/ticket/471> MCRF tumor registry data not available in standard NAACCR file format<https://informatics.gpcnetwork.org/trac/Project/ticket/471> - note progress; any help we can provide? * #358<https://informatics.gpcnetwork.org/trac/Project/ticket/358> NAACCR ETL: update all sites to include summary of treatment etc.<https://informatics.gpcnetwork.org/trac/Project/ticket/358> how many sites can we get started? * #356 (BC Datamart Protoype - aggregated and consolidated 'REDCap Phase1 ...) reopened<https://informatics.gpcnetwork.org/trac/Project/ticket/356#comment:30> * Review depgraph<https://informatics.gpcnetwork.org/trac/Project/depgraph/milestone/cohort-char-bc-db> 7. Milestone:next-d<https://informatics.gpcnetwork.org/trac/Project/milestone/next-d> * #508 (Handling small geographic areas in geocoded data for Next-D) <https://informatics.gpcnetwork.org/trac/Project/ticket/508>Options resulting from i2b2 academic user group discussion. Is de-id data actually the target? 8. INVESTED Update Meeting<http://listserv.kumc.edu/pipermail/gpc-dev/2016q2/002887.html> Thomas Mish “we should probably update the query both to align it with any changes to the terminology standards and any alterations due to new understanding of the project that may have occurred subsequent to the original query. Either Eneida or I could help you with that.” 9. FW: 2016 i2b2 AUG-SHRINE meeting (June 21)<http://listserv.kumc.edu/pipermail/gpc-dev/2016q2/002861.html> Dan Connolly ________________________________ -- Dan
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