I was finally successful at implementing Dan’s recommended version of the
DataBuilder (ver: 1b8a53f78be0) into the current version of I2B2 (1.7.07c).
Besides having to manually apply the patches, I found that the variable
declaration was missing for the backend variable in DFBuilder/tool_widgets.js
(line 175).
var backend = pop(params, 'backend') == 'builder' ? this.builder : this.rgate;
I will say that while it is certainly nice to be able to have a quick demo of
the plugin using the I2B2 Demo VM, the community would probably be better
served by a well-documented step-by-step installation procedure.
--Tony
Tony French | Software Development Manager
Tools and Shared Resources
Center for Biomedical Informatics
[cid:[email protected]]
1101 West Tenth Street
Indianapolis, IN, 46202
Tel 317-274-9087 | Fax: 317-274-9305
Twitter: @Regenstrief |
Facebook.com/regenstriefinstitute<http://facebook.com/regenstriefinstitute>
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From: Dan Connolly [mailto:[email protected]]
Sent: Thursday, July 07, 2016 12:11 PM
To: French, Tony; [email protected]
Subject: RE: DataBuilder installation instructions
That's pretty much the main installation documentation, still. And that it is
out of date is a known problem:
* #335: problem: DataBuilder VM deployment outdated by migration of middle
tier to jboss
<https://informatics.gpcnetwork.org/trac/Project/ticket/335>
I suggest you report details of the errors you're getting; perhaps there are
easy fixes to the documentation that will get you going.
Be sure to include the exact revision hash of the code you're trying to use; if
you checked out the current code from the
heron_extract<ssh://elephant.gpcnetwork.org/mnt/crypt/gpc-repos/heron_extract/>
repository, you might have better luck with an older version (such as rev
1b8a53f78be0 from Nov 2014, available in
heron_extract.zip<https://informatics.gpcnetwork.org/trac/Project/attachment/wiki/BuilderSaga/heron_extract.zip>).
--
Dan
________________________________
From:
[email protected]<mailto:[email protected]>
[[email protected]] on behalf of French, Tony
[[email protected]]
Sent: Thursday, July 07, 2016 10:56 AM
To: [email protected]<mailto:[email protected]>
Subject: DataBuilder installation instructions
We are working on getting DataBuilder installed in our environment. I found
the
BuilderSaga<redir.aspx?REF=zSf-HFNZkBstgNFcFHAyI_qXOafaDxYqhSD6A22IN_luoaBygKbTCAFodHRwczovL2luZm9ybWF0aWNzLmdwY25ldHdvcmsub3JnL3RyYWMvUHJvamVjdC93aWtpL0J1aWxkZXJTYWdh>
article for installing it into an i2b2 demo VM. Is that the best guide to
reference for installing it into an actual working environment or are there
step by step manual instructions available anywhere?
I have tried following the screencast to install using the latest i2b2 demo VM
but have already ran into several errors. Does anyone have a historical link to
i2b2vmware-1703a.zip ?
Thanks,
Tony
Tony French | Software Development Manager
Tools and Shared Resources
Center for Biomedical Informatics
[cid:[email protected]]
1101 West Tenth Street
Indianapolis, IN, 46202
Tel 317-274-9087 | Fax: 317-274-9305
Twitter: @Regenstrief |
Facebook.com/regenstriefinstitute<redir.aspx?REF=Ealdo_5-UMApu3z6jswibd0neuOY3VO0GHUA-yVY9CZuoaBygKbTCAFodHRwOi8vZmFjZWJvb2suY29tL3JlZ2Vuc3RyaWVmaW5zdGl0dXRl>
www.regenstrief.org<redir.aspx?REF=KaNjOpTaHK9O0TGybQ4IVio03egtl8DZ6nq791VoMD1uoaBygKbTCAFodHRwOi8vd3d3LnJlZ2Vuc3RyaWVmLm9yZy8.>
Confidentiality Notice: The contents of this message and any files transmitted
with it may contain confidential and/or privileged information and are intended
solely for the use of the named addressee(s). Additionally, the information
contained herein may have been disclosed to you from medical records with
confidentiality protected by federal and state laws. Federal regulations and
State laws prohibit you from making further disclosure of such information
without the specific written consent of the person to whom the information
pertains or as otherwise permitted by such regulations. A general authorization
for the release of medical or other information is not sufficient for this
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