#358: NAACCR ETL: update all sites to include summary of treatment etc.
-------------------------+-------------------------------------------------
Reporter: dconnolly | Owner: dconnolly
Type: task | Status: assigned
Priority: major | Milestone: cohort-char-bc-db
Component: data- | Resolution:
sharing | Blocked By: 49, 150, 246, 258, 331, 332, 333,
Keywords: | 355, 471, 529
Blocking: 297 |
-------------------------+-------------------------------------------------
Changes (by dconnolly):
* cc: gpc-dev@… (added)
* owner: lv => dconnolly
* status: accepted => assigned
Comment:
Are sites deploying site-specific factors stuff from march (comment:22)
while they're at it?
Now that babel has current KUMC terms, you can see it there:
{{{
<concept>
<level>5</level>
<key>\\KUMC_naaccr\i2b2\naaccr\csterms\Breast\CS Site-
Specific Factor 1\010\</key>
<name>010: Positive/elevated [5,226 facts; ...
patients]</name>
<basecode>CS|Breast|1:010</basecode>
<tooltip>Cancer Cases \ Cancer Staging: Site-Specific
Factors \ Breast \ 01: Estrogen Receptor (ER) Assay</tooltip>
</concept>
}}}
But the babel terms from UTSW, MU, and CMH lack it, based on:
{{{
with all_terms as (
select 'utsw_terms', c_hlevel, c_name, c_fullname, c_basecode from
i2b2metadata.utsw_terms s
)
select *
from all_terms
where c_fullname like '%\naaccr\csterms\Breast\CS Site-Specific Factor
1\010\%'
and c_hlevel = 3
}}}
''p.s. lv did her bit... ETA 10 Oct given in ticket:471#comment:11''
--
Ticket URL:
<http://informatics.gpcnetwork.org/trac/Project/ticket/358#comment:36>
gpc-informatics <http://informatics.gpcnetwork.org/>
Greater Plains Network - Informatics
_______________________________________________
Gpc-dev mailing list
[email protected]
http://listserv.kumc.edu/mailman/listinfo/gpc-dev
